Detailed information of evm.model.Ap11.720 in Astrangia poculata

Genomic Location: Ap11:7946271...7991431
NR annotation: CAH3161686.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6V4S5Protein sidekick-2 OS=Mus musculus OX=10090 GN=Sdk2 PE=1 SV=1
Q8AV58Protein sidekick-1 OS=Gallus gallus OX=9031 GN=SDK1 PE=1 SV=1
Q58EX2Protein sidekick-2 OS=Homo sapiens OX=9606 GN=SDK2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000019 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07885
all species →
Ion_trans_2Ion channelFamilyInterproscan
PF07534
all species →
TLDTLDDomainInterproscan
PF00041
all species →
fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961
all species →
DomainFibronectin type IIIInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116
all species →
Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013099
all species →
DomainPotassium channel domainInterproscan
IPR050379
all species →
FamilyType I Cytokine ReceptorInterproscan
IPR006571
all species →
DomainTLDc domainInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23036
all species →
CYTOKINE RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0004896
all species →
Molecular Functioncytokine receptor activityInterproscan
GO:0009897
all species →
Cellular Componentexternal side of plasma membraneInterproscan
GO:0019221
all species →
Biological Processcytokine-mediated signaling pathwayInterproscan
GO:0019955
all species →
Molecular Functioncytokine bindingInterproscan
GO:0043235
all species →
Cellular Componentreceptor complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16353SDK; protein sidekick-Cell adhesion moleculesko04515deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP