Gene detail

Detailed information of evm.model.Ap11.779 in Astrangia poculata

Genomic Location: Ap11:8419767...8432506
NR annotation: KAJ7390113.1, hypothetical protein OS493_027149 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q08CH3	MPN domain-containing protein OS=Danio rerio OX=7955 GN=mpnd PE=2 SV=1
Q3TV65	MPN domain-containing protein OS=Mus musculus OX=10090 GN=Mpnd PE=1 SV=2
Q8N594	MPN domain-containing protein OS=Homo sapiens OX=9606 GN=MPND PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005228 (this species only)
Ubiquitin family	UBD\|Other\|Jab_MPN · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01398 all species →	JAB	JAB1/Mov34/MPN/PAD-1 ubiquitin protease	Family	Interproscan
PF18755 all species →	RAMA	Restriction Enzyme Adenine Methylase Associated	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037518 all species →	Domain	MPN domain	Interproscan
IPR000555 all species →	Domain	JAB1/MPN/MOV34 metalloenzyme domain	Interproscan
IPR040843 all species →	Domain	Restriction enzyme adenine methylase associated	Interproscan
IPR050242 all species →	Family	JAMM/MPN+ metalloenzymes, peptidase M67A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10410 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24173	MPND; MPN domain-containing protein	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.