Detailed information of evm.model.Ap11.832 in Astrangia poculata

Genomic Location: Ap11:9081238...9088458
NR annotation: XP_020630113.1, COP9 signalosome complex subunit 8-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P637COP9 signalosome complex subunit 8 OS=Xenopus tropicalis OX=8364 GN=csn8 PE=2 SV=1
Q7ZUZ0COP9 signalosome complex subunit 8 OS=Danio rerio OX=7955 GN=cops8 PE=2 SV=1
Q8VBV7COP9 signalosome complex subunit 8 OS=Mus musculus OX=10090 GN=Cops8 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007364 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10075
all species →		CSN8_PSD8_EIF3KCSN8/PSMD8/EIF3K familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000717
all species →		DomainProteasome component (PCI) domainInterproscan
IPR033464
all species →		DomainCSN8/PSMD8/EIF3KInterproscan
IPR033205
all species →		FamilyCOP9 signalosome, subunit CSN8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13339
all species →		COP9 SIGNALOSOME COMPLEX SUBUNIT 8Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000338
all species →		Biological Processprotein deneddylationInterproscan
GO:0008180
all species →		Cellular ComponentCOP9 signalosomeInterproscan
GO:0010387
all species →		Biological ProcessCOP9 signalosome assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12181COPS8, CSN8; COP9 signalosome complex subunit 8-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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