Detailed information of evm.model.Ap11.836.1.5f15dc6e in Astrangia poculata

Genomic Location: Ap11:9136882...9147274
NR annotation: XP_027056358.1, zinc finger CCCH domain-containing protein 15-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DD06Zinc finger CCCH domain-containing protein 15 OS=Xenopus laevis OX=8355 GN=zc3h15 PE=2 SV=1
Q8WU90Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens OX=9606 GN=ZC3H15 PE=1 SV=1
Q1RMM1Zinc finger CCCH domain-containing protein 15 OS=Bos taurus OX=9913 GN=ZC3H15 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006428 (this species only)
Transcription factor familyzf-CCCH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16543
all species →		DFRP_CDRG Family Regulatory Proteins, Tma46DomainInterproscan
PF00642
all species →		zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF14608
all species →		zf-CCCH_2RNA-binding, Nab2-type zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR036855
all species →		Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR032378
all species →		DomainZC3H15/TMA46 family, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12681
all species →		ZINC FINGER-CONTAINING PROTEIN P48ZNFInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0002181
all species →		Biological Processcytoplasmic translationInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.836.1.5f15dc6e.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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