Detailed information of evm.model.Ap11.837 in Astrangia poculata

Genomic Location: Ap11:9148131...9150488
NR annotation: XP_020617237.1, heat shock transcription factor, X-linked-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P38530Heat shock factor protein 2 OS=Gallus gallus OX=9031 GN=HSF2 PE=2 SV=1
Q4G112Heat shock factor protein 5 OS=Homo sapiens OX=9606 GN=HSF5 PE=1 SV=3
P22121Heat shock transcription factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=HSF PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002258 (this species only)
Transcription factor familyHSF · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00447
all species →		HSF_DNA-bindHSF-type DNA-bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027725
all species →		FamilyHeat shock transcription factor familyInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR000232
all species →		DomainHeat shock factor (HSF)-type, DNA-bindingInterproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10015
all species →		HEAT SHOCK TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.837.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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