Detailed information of evm.model.Ap11.904.1.5f15dc94 in Astrangia poculata

Genomic Location: Ap11:9996912...10015063
NR annotation: XP_020623204.1, tricalbin-1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D4ABL6Multiple C2 and transmembrane domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Mctp1 PE=1 SV=4
E9PV86Multiple C2 and transmembrane domain-containing protein 1 OS=Mus musculus OX=10090 GN=Mctp1 PE=1 SV=1
A0JJX5Synaptotagmin-4 OS=Arabidopsis thaliana OX=3702 GN=SYT4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001792 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168
all species →		C2C2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000008
all species →		DomainC2 domainInterproscan
IPR052455
all species →		FamilyTricalbin domain-containing proteinInterproscan
IPR035892
all species →		Homologous_superfamilyC2 domain superfamilyInterproscan
IPR031468
all species →		DomainSynaptotagmin-like mitochondrial-lipid-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46980
all species →		TRICALBIN-1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008289
all species →		Molecular Functionlipid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.904.1.5f15dc94.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP