Detailed information of evm.model.Ap11.951 in Astrangia poculata

Genomic Location: Ap11:10477831...10487254
NR annotation: XP_020623128.1, tyrosine-protein phosphatase non-receptor type 23-like isoform X2 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H3S7Tyrosine-protein phosphatase non-receptor type 23 OS=Homo sapiens OX=9606 GN=PTPN23 PE=1 SV=1
Q6PB44Tyrosine-protein phosphatase non-receptor type 23 OS=Mus musculus OX=10090 GN=Ptpn23 PE=1 SV=2
O88902Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003722 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03097
all species →		BRO1BRO1-like domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045251
all species →		FamilyVacuolar protein-sorting protein Bro1-likeInterproscan
IPR038499
all species →		Homologous_superfamilyBRO1 domain superfamilyInterproscan
IPR004328
all species →		DomainBRO1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23030
all species →		PCD6 INTERACTING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0032456
all species →		Biological Processendocytic recyclingInterproscan
GO:0043328
all species →		Biological Processprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathwayInterproscan
GO:0045022
all species →		Biological Processearly endosome to late endosome transportInterproscan
GO:0071985
all species →		Biological Processmultivesicular body sorting pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap11.951.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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