Gene detail

Detailed information of evm.model.Ap12.1008 in Astrangia poculata

Genomic Location: Ap12:11001528...11002643
NR annotation: XP_020609912.1, fatty acid hydroxylase domain-containing protein 2-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9GKT2	Fatty acid hydroxylase domain-containing protein 2 OS=Macaca fascicularis OX=9541 GN=FAXDC2 PE=2 SV=1
Q96IV6	Fatty acid hydroxylase domain-containing protein 2 OS=Homo sapiens OX=9606 GN=FAXDC2 PE=1 SV=1
A0A0D1DT68	Fatty acid hydroxylase ahd1 OS=Mycosarcoma maydis OX=5270 GN=ahd1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005487 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04116 all species →	FA_hydroxylase	Fatty acid hydroxylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006694 all species →	Domain	Fatty acid hydroxylase	Interproscan
IPR050307 all species →	Family	Sterol Desaturase and Related Enzymes	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11863 all species →	STEROL DESATURASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0008610 all species →	Biological Process	lipid biosynthetic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0000254 all species →	Molecular Function	C-4 methylsterol oxidase activity	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0016126 all species →	Biological Process	sterol biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22282	FAXDC2; fatty acid hydroxylase domain-containing protein 2	-	Lipid metabolism	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.