Gene detail

Detailed information of evm.model.Ap12.105 in Astrangia poculata

Genomic Location: Ap12:978404...980210
NR annotation: KAJ7386224.1, hypothetical protein OS493_010619 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P29372	DNA-3-methyladenine glycosylase OS=Homo sapiens OX=9606 GN=MPG PE=1 SV=3
Q04841	DNA-3-methyladenine glycosylase OS=Mus musculus OX=10090 GN=Mpg PE=2 SV=3
P23571	DNA-3-methyladenine glycosylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Mpg PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008888 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02245 all species →	Pur_DNA_glyco	Methylpurine-DNA glycosylase (MPG)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003180 all species →	Family	Methylpurine-DNA glycosylase	Interproscan
IPR036995 all species →	Homologous_superfamily	Methylpurine-DNA glycosylase superfamily	Interproscan
IPR011034 all species →	Homologous_superfamily	Formyl transferase-like, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10429 all species →	DNA-3-METHYLADENINE GLYCOSYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003905 all species →	Molecular Function	alkylbase DNA N-glycosylase activity	Interproscan
GO:0006284 all species →	Biological Process	base-excision repair	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03652	MPG; DNA-3-methyladenine glycosylase	EC:3.2.2.21	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.