Gene detail

Detailed information of evm.model.Ap12.1067 in Astrangia poculata

Genomic Location: Ap12:11529539...11535764
NR annotation: CAH3105726.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91XV4	L-xylulose reductase OS=Mesocricetus auratus OX=10036 GN=DCXR PE=1 SV=1
Q1JP75	L-xylulose reductase OS=Bos taurus OX=9913 GN=DCXR PE=2 SV=1
Q91X52	L-xylulose reductase OS=Mus musculus OX=10090 GN=Dcxr PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001090 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13561 all species →	adh_short_C2	Enoyl-(Acyl carrier protein) reductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002347 all species →	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR020904 all species →	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan
IPR051737 all species →	Family	L-xylulose reductase/Carbonyl reductase	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44252 all species →	D-ERYTHRULOSE REDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0004090 all species →	Molecular Function	carbonyl reductase (NADPH) activity	Interproscan
GO:0005997 all species →	Biological Process	xylulose metabolic process	Interproscan
GO:0006006 all species →	Biological Process	glucose metabolic process	Interproscan
GO:0050038 all species →	Molecular Function	L-xylulose reductase (NADPH) activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03331	DCXR; L-xylulose reductase	EC:1.1.1.10	Pentose and glucuronate interconversions	ko00040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.