Detailed information of evm.model.Ap12.1097 in Astrangia poculata

Genomic Location: Ap12:11882719...11885611
NR annotation: KAJ7372625.1, hypothetical protein OS493_017896 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5REC3Complex III assembly factor LYRM7 OS=Pongo abelii OX=9601 GN=LYRM7 PE=3 SV=1
B4F7A1Complex III assembly factor LYRM7 OS=Rattus norvegicus OX=10116 GN=Lyrm7 PE=3 SV=1
Q2M2S9Complex III assembly factor LYRM7 OS=Bos taurus OX=9913 GN=LYRM7 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009663 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05347
all species →		Complex1_LYRComplex 1 protein (LYR family)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045298
all species →		DomainLYRM7, LYR domainInterproscan
IPR008011
all species →		DomainComplex 1 LYR protein domainInterproscan
IPR050435
all species →		FamilyMitochondrial Zinc Maintenance Protein 1 / LYRM7Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46749
all species →		COMPLEX III ASSEMBLY FACTOR LYRM7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0034551
all species →		Biological Processmitochondrial respiratory chain complex III assemblyInterproscan
GO:0005759
all species →		Cellular Componentmitochondrial matrixInterproscan
GO:0044183
all species →		Molecular Functionprotein folding chaperoneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18170LYRM7, MZM1; complex III assembly factor LYRM7-Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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