Gene detail

Detailed information of evm.model.Ap12.1270 in Astrangia poculata

Genomic Location: Ap12:13514679...13553898
NR annotation: XP_020624160.1, kinesin-like protein KIF19 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap12.1270

atgtcagacaaggagaaggggaaggaaagcactcaaaccttgatggttgctgttcgagtgaggcccttgaacggaagcgaagtcgaagacgaaagatgcacagaaattgtccatgtgttggatgaaaacctggttgtgttaaaggatcccaatgaagatcaagacgacattctcagagccaacagatccagggaaaagcagtacatttttgattgtgcattagggccaaactccaatcaggctgaagtatacaaggcagtggccaaacctttgattgaaaatgtcatcacaggatataatgctacagtctttgcttatggagcaacaggagctgggaaaaccttcaccatgttaggtactgacaaagaacctggtataatggcacgtaccttaaatgatcttttctttgaaatggacaagaccaaggaagatatgaaatacaaagtatcaatgtcctatctggaaatctacaatgaaatgattcgtgacttgttaaacccatcttctggatttcttgagttgcgtgaagatggtcggggagttgtggtggctgggatctctgaagttcaagccaagaaaactagtgaggtaatggacttgcttgtaatgggaaacaaacaaagaacaagtgagccaaccgctgccaacaaaacttcatcaagatcacatgcaatcctccaggtaacagtaacccagaagagccgtgtcaaaaatacaattgatgaatttagagttgggaagcttttcatgattgatttggctggatctgagagagctgcacagaccaagaatcgtggcaaaaggatgatagaaggagcacacatcaaccgttccctgcttgccttgggaaactgcatcaatgcattgagtgaaaatcgtggccattatgtcaactacagagatagtaaactgaccaggctcttaaaggattcattgggtggtaactgtcggacagtcatgattgctcatgcaagtcctgcaagtggatcctttgaggaaactcgtaacacacttctgtatgcagacagggccaagaatatcaaaacaaacatcaaaccaaaccagttcagtgtgtcgtaccacatcgcacagtacaccaacatcattgctgatttgagaaaggaaatatttcgtcttaaactcaaaatctctgaacatgatacagaaaatggcgacaacccaaaaaagggacagcaaaaggacaagaatccagaagagatgaacagactgcgagatcagcttgtcagcacgtttaaagagcagatggacatcaggcgcaagctgatagagcttgaggacgcggccatgcagatttcacttgacatgaacagatacatgctggtgatagacgaatgggaacaagagaaagctagaagaggagtacgcaaaaataccagaagtttgtcagagaaaaccgacgaatccgagcttagaaacgacctgacaaacctggccttgaccgacgatgaaagcggagagaaaaacttcgactcggccacacaagacaaacatttacttggcgacagtcaccgtgaagtcacatcactgtctgcttccgatagcttggaagatgttgaaaacaaagacttggacactgaaaaagataacaaggcggaattgagtaatgagaaaggtgcagggattgcagaacccgaagaagtaacttttgcgcgagaagaaataagcaccttgatcgcagaagagaaacgcacttctgacctcaaagctgatcttcaagggaaacttcaacagaccagaaaggaggtggaagctttggaggagcttttacccaaaaagataagcagcgaagaaaatcgagaaattttaggattgttgtgcaaagtccacgagctggagattactaatgccgagcttcagtctaactcgttacttagagagaatttactgaggcagaaggatttggagatgaacaaattcgagtcgcggcaaagactttgcgatgaaatcattcaaatgcagagggcggtaataaacgattctgggattcagtgttcggcagaacttcaggcactttatgatgtttacatggagcaatcagctgactttgaacaacgtgaaaacagcgcggcaagttcacaagaaaacgcgcaaggctccttgaactcgacacagaaggcctcgctccttgctgggcttaatcgacgaatgatgcccttggcacgagagaggttattcaccttcagtaagctgtccccactgagcgaagagacgccttctcgtatggtgtcattacagaactcaccagtcaagatgtcacgtgcgacaccttctgctcacactcagatgtcagacgacgtgttcacacgagaatccagttccccgctgcctttgcctacgcccaagaaaacgaagaagcttttcactttcactgaggacggtgaaagtgatcgcagttcaccaaccgtctcgtccgttatggaagatggacatgaagaattgaagcccgctacgccagccagtcctgtctttgccaggacgcgaaaaatcgccgagatcgccgcacgccgacgagtcggcctggacaagagtcttagtagtataagtaaaactagcttggagcctggtggcgagcttcctacgaaatcgaactctgttacagacatgcgcatacacgaacaagctcccgccaatcagaaggtaaaagtcaacaagggactgtcggtaaaggcgtctcgaagtatgagtgacttgtccgtgattgacaagagggctggagacgtttcatcggaagactcggctccagtggacagaagaaagggagcagctaagagcaaggtgaaaaaggcccctcaaaggaagcccaggagattacgttccgcgtctttagatgattccaaagtattgagagtgaaaccacgacgcacgcgcaaggaggagttacaagaagcggcaagacagagagtggccgccgcattggcccaatcaaatactaggaatcgagtgtatggaggacaagccacggagggacggaaagccggcggacctcgacgatcaaaaggaacaataaactccaagcccacccctgtgaagggtattgagcatgaaggtggaaagacaacagtaaaaccggcgagctctgcagcaagtaatctacaagatggcgatttgcaaactttctggacaaacgtgactccaccctcgactgtccaccaatacggagtcacttacggcaagggacacaccattcaaaagagataccgcggaccatctgagattagcggcaccgattcgaaccagtccactcctaggctcaagccgaggaaaaagcccccgaaaactggaacgagatctgtggatgaactgtcagtgagtggtgttgctgtgcgtccgacaaaacaggctgcgggcgtgcgcagaagttga

Transcript

evm.model.Ap12.1270

ATGTCAGACAAGGAGAAGGGGAAGGAAAGCACTCAAACCTTGATGGTTGCTGTTCGAGTGAGGCCCTTGAACGGAAGCGAAGTCGAAGACGAAAGATGCACAGAAATTGTCCATGTGTTGGATGAAAACCTGGTTGTGTTAAAGGATCCCAATGAAGATCAAGACGACATTCTCAGAGCCAACAGATCCAGGGAAAAGCAGTACATTTTTGATTGTGCATTAGGGCCAAACTCCAATCAGGCTGAAGTATACAAGGCAGTGGCCAAACCTTTGATTGAAAATGTCATCACAGGATATAATGCTACAGTCTTTGCTTATGGAGCAACAGGAGCTGGGAAAACCTTCACCATGTTAGGTACTGACAAAGAACCTGGTATAATGGCACGTACCTTAAATGATCTTTTCTTTGAAATGGACAAGACCAAGGAAGATATGAAATACAAAGTATCAATGTCCTATCTGGAAATCTACAATGAAATGATTCGTGACTTGTTAAACCCATCTTCTGGATTTCTTGAGTTGCGTGAAGATGGTCGGGGAGTTGTGGTGGCTGGGATCTCTGAAGTTCAAGCCAAGAAAACTAGTGAGGTAATGGACTTGCTTGTAATGGGAAACAAACAAAGAACAAGTGAGCCAACCGCTGCCAACAAAACTTCATCAAGATCACATGCAATCCTCCAGGTAACAGTAACCCAGAAGAGCCGTGTCAAAAATACAATTGATGAATTTAGAGTTGGGAAGCTTTTCATGATTGATTTGGCTGGATCTGAGAGAGCTGCACAGACCAAGAATCGTGGCAAAAGGATGATAGAAGGAGCACACATCAACCGTTCCCTGCTTGCCTTGGGAAACTGCATCAATGCATTGAGTGAAAATCGTGGCCATTATGTCAACTACAGAGATAGTAAACTGACCAGGCTCTTAAAGGATTCATTGGGTGGTAACTGTCGGACAGTCATGATTGCTCATGCAAGTCCTGCAAGTGGATCCTTTGAGGAAACTCGTAACACACTTCTGTATGCAGACAGGGCCAAGAATATCAAAACAAACATCAAACCAAACCAGTTCAGTGTGTCGTACCACATCGCACAGTACACCAACATCATTGCTGATTTGAGAAAGGAAATATTTCGTCTTAAACTCAAAATCTCTGAACATGATACAGAAAATGGCGACAACCCAAAAAAGGGACAGCAAAAGGACAAGAATCCAGAAGAGATGAACAGACTGCGAGATCAGCTTGTCAGCACGTTTAAAGAGCAGATGGACATCAGGCGCAAGCTGATAGAGCTTGAGGACGCGGCCATGCAGATTTCACTTGACATGAACAGATACATGCTGGTGATAGACGAATGGGAACAAGAGAAAGCTAGAAGAGGAGTACGCAAAAATACCAGAAGTTTGTCAGAGAAAACCGACGAATCCGAGCTTAGAAACGACCTGACAAACCTGGCCTTGACCGACGATGAAAGCGGAGAGAAAAACTTCGACTCGGCCACACAAGACAAACATTTACTTGGCGACAGTCACCGTGAAGTCACATCACTGTCTGCTTCCGATAGCTTGGAAGATGTTGAAAACAAAGACTTGGACACTGAAAAAGATAACAAGGCGGAATTGAGTAATGAGAAAGGTGCAGGGATTGCAGAACCCGAAGAAGTAACTTTTGCGCGAGAAGAAATAAGCACCTTGATCGCAGAAGAGAAACGCACTTCTGACCTCAAAGCTGATCTTCAAGGGAAACTTCAACAGACCAGAAAGGAGGTGGAAGCTTTGGAGGAGCTTTTACCCAAAAAGATAAGCAGCGAAGAAAATCGAGAAATTTTAGGATTGTTGTGCAAAGTCCACGAGCTGGAGATTACTAATGCCGAGCTTCAGTCTAACTCGTTACTTAGAGAGAATTTACTGAGGCAGAAGGATTTGGAGATGAACAAATTCGAGTCGCGGCAAAGACTTTGCGATGAAATCATTCAAATGCAGAGGGCGGTAATAAACGATTCTGGGATTCAGTGTTCGGCAGAACTTCAGGCACTTTATGATGTTTACATGGAGCAATCAGCTGACTTTGAACAACGTGAAAACAGCGCGGCAAGTTCACAAGAAAACGCGCAAGGCTCCTTGAACTCGACACAGAAGGCCTCGCTCCTTGCTGGGCTTAATCGACGAATGATGCCCTTGGCACGAGAGAGGTTATTCACCTTCAGTAAGCTGTCCCCACTGAGCGAAGAGACGCCTTCTCGTATGGTGTCATTACAGAACTCACCAGTCAAGATGTCACGTGCGACACCTTCTGCTCACACTCAGATGTCAGACGACGTGTTCACACGAGAATCCAGTTCCCCGCTGCCTTTGCCTACGCCCAAGAAAACGAAGAAGCTTTTCACTTTCACTGAGGACGGTGAAAGTGATCGCAGTTCACCAACCGTCTCGTCCGTTATGGAAGATGGACATGAAGAATTGAAGCCCGCTACGCCAGCCAGTCCTGTCTTTGCCAGGACGCGAAAAATCGCCGAGATCGCCGCACGCCGACGAGTCGGCCTGGACAAGAGTCTTAGTAGTATAAGTAAAACTAGCTTGGAGCCTGGTGGCGAGCTTCCTACGAAATCGAACTCTGTTACAGACATGCGCATACACGAACAAGCTCCCGCCAATCAGAAGGTAAAAGTCAACAAGGGACTGTCGGTAAAGGCGTCTCGAAGTATGAGTGACTTGTCCGTGATTGACAAGAGGGCTGGAGACGTTTCATCGGAAGACTCGGCTCCAGTGGACAGAAGAAAGGGAGCAGCTAAGAGCAAGGTGAAAAAGGCCCCTCAAAGGAAGCCCAGGAGATTACGTTCCGCGTCTTTAGATGATTCCAAAGTATTGAGAGTGAAACCACGACGCACGCGCAAGGAGGAGTTACAAGAAGCGGCAAGACAGAGAGTGGCCGCCGCATTGGCCCAATCAAATACTAGGAATCGAGTGTATGGAGGACAAGCCACGGAGGGACGGAAAGCCGGCGGACCTCGACGATCAAAAGGAACAATAAACTCCAAGCCCACCCCTGTGAAGGGTATTGAGCATGAAGGTGGAAAGACAACAGTAAAACCGGCGAGCTCTGCAGCAAGTAATCTACAAGATGGCGATTTGCAAACTTTCTGGACAAACGTGACTCCACCCTCGACTGTCCACCAATACGGAGTCACTTACGGCAAGGGACACACCATTCAAAAGAGATACCGCGGACCATCTGAGATTAGCGGCACCGATTCGAACCAGTCCACTCCTAGGCTCAAGCCGAGGAAAAAGCCCCCGAAAACTGGAACGAGATCTGTGGATGAACTGTCAGTGAGTGGTGTTGCTGTGCGTCCGACAAAACAGGCTGCGGGCGTGCGCAGAAGTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7ZXX2	Kinesin-like protein KIF19 OS=Xenopus laevis OX=8355 GN=kif19 PE=2 SV=1
Q99PT9	Kinesin-like protein KIF19 OS=Mus musculus OX=10090 GN=Kif19 PE=1 SV=2
Q2TAC6	Kinesin-like protein KIF19 OS=Homo sapiens OX=9606 GN=KIF19 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007711 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019821 all species →	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027640 all species →	Family	Kinesin-like protein	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968 all species →	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K26157	KIF19; kinesin family member 19	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.