Detailed information of evm.model.Ap12.1272 in Astrangia poculata

Genomic Location: Ap12:13577792...13582115
NR annotation: XP_020624152.1, ras-related protein Rap-2a-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P70426GTP-binding protein Rit1 OS=Mus musculus OX=10090 GN=Rit1 PE=1 SV=1
Q92963GTP-binding protein Rit1 OS=Homo sapiens OX=9606 GN=RIT1 PE=1 SV=1
P22278Ras-like protein 1 OS=Mucor circinelloides f. lusitanicus OX=29924 GN=RAS1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009528 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00071
all species →
RasRas familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020849
all species →
FamilySmall GTPase, Ras-typeInterproscan
IPR001806
all species →
FamilySmall GTPaseInterproscan
IPR005225
all species →
DomainSmall GTP-binding protein domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24070
all species →
RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003924
all species →
Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →
Molecular FunctionGTP bindingInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007165
all species →
Biological Processsignal transductionInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0019003
all species →
Molecular FunctionGDP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.1272.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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