Detailed information of evm.model.Ap12.1297 in Astrangia poculata

Genomic Location: Ap12:13804112...13807028
NR annotation: XP_020624167.1, eukaryotic translation initiation factor 3 subunit L-like, partial [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7SDW5Eukaryotic translation initiation factor 3 subunit L OS=Nematostella vectensis OX=45351 GN=v1g169424 PE=3 SV=1
Q8AVJ0Eukaryotic translation initiation factor 3 subunit L OS=Xenopus laevis OX=8355 GN=eif3l PE=2 SV=1
Q6P878Eukaryotic translation initiation factor 3 subunit L OS=Xenopus tropicalis OX=8364 GN=eif3l PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005683 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10255
all species →		Paf67RNA polymerase I-associated factor PAF67RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019382
all species →		FamilyTranslation initiation factor 3 complex subunit LInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13242
all species →		EUKARYOTIC TRANSLATION INITIATION FACTOR 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003743
all species →		Molecular Functiontranslation initiation factor activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005852
all species →		Cellular Componenteukaryotic translation initiation factor 3 complexInterproscan
GO:0006413
all species →		Biological Processtranslational initiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.1297.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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