Detailed information of evm.model.Ap12.1307 in Astrangia poculata

Genomic Location: Ap12:13881397...13882947
NR annotation: XP_020611061.1, sodium/potassium/calcium exchanger 3-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9HC58Sodium/potassium/calcium exchanger 3 OS=Homo sapiens OX=9606 GN=SLC24A3 PE=1 SV=4
Q9EPQ0Sodium/potassium/calcium exchanger 3 (Fragment) OS=Rattus norvegicus OX=10116 GN=Slc24a3 PE=1 SV=1
Q99PD7Sodium/potassium/calcium exchanger 3 OS=Mus musculus OX=10090 GN=Slc24a3 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000757 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01699
all species →		Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044880
all species →		Homologous_superfamilyNCX, central ion-binding domain superfamilyInterproscan
IPR004481
all species →		FamilySodium/potassium/calcium exchangerInterproscan
IPR004837
all species →		DomainSodium/calcium exchanger membrane regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10846
all species →		SODIUM/POTASSIUM/CALCIUM EXCHANGERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0006874
all species →		Biological Processintracellular calcium ion homeostasisInterproscan
GO:0008273
all species →		Molecular Functioncalcium, potassium:sodium antiporter activityInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.1307.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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