Detailed information of evm.model.Ap12.1380 in Astrangia poculata

Genomic Location: Ap12:14518399...14528861
NR annotation: XP_027057874.1, uncharacterized protein LOC113684682 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008862 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16756
all species →		PALB2_WD40Partner and localizer of BRCA2 WD40 domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011047
all species →		Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR042417
all species →		FamilyPartner and localizer of BRCA2Interproscan
IPR031920
all species →		DomainPartner and localiser of BRCA2, WD40 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14662
all species →		PARTNER AND LOCALIZER OF BRCA2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.1380.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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