Gene detail

Detailed information of evm.model.Ap12.1382 in Astrangia poculata

Genomic Location: Ap12:14546770...14547450
NR annotation: XP_020605352.1, PITH domain-containing protein 1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9GZP4	PITH domain-containing protein 1 OS=Homo sapiens OX=9606 GN=PITHD1 PE=1 SV=1
Q6NYX8	PITH domain-containing protein 1 OS=Danio rerio OX=7955 GN=pithd1 PE=2 SV=1
Q8BWR2	PITH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Pithd1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009613 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06201 all species →	PITH	PITH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010400 all species →	Domain	PITH domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR037047 all species →	Homologous_superfamily	PITH domain superfamily	Interproscan
IPR045099 all species →	Family	PITH domain-containing protein 1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12175 all species →	AD039 HT014 THIOREDOXIN FAMILY TRP26	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap12.1382.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.