Detailed information of evm.model.Ap12.1416 in Astrangia poculata

Genomic Location: Ap12:14814263...14814844
NR annotation: XP_020605787.1, ADP-ribosylation factor 3-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5E9I6ADP-ribosylation factor 3 OS=Bos taurus OX=9913 GN=ARF3 PE=2 SV=3
P61204ADP-ribosylation factor 3 OS=Homo sapiens OX=9606 GN=ARF3 PE=1 SV=2
P61205ADP-ribosylation factor 3 OS=Mus musculus OX=10090 GN=Arf3 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000273 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00025
all species →		ArfADP-ribosylation factor familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006689
all species →		FamilySmall GTPase superfamily, ARF/SAR typeInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR024156
all species →		FamilySmall GTPase superfamily, ARF typeInterproscan
IPR005225
all species →		DomainSmall GTP-binding protein domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11711
all species →		ADP RIBOSYLATION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.1416.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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