Gene detail

Detailed information of evm.model.Ap12.1460 in Astrangia poculata

Genomic Location: Ap12:15316500...15329885
NR annotation: CAH3040160.1, unnamed protein product, partial [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8VBT9	Tether containing UBX domain for GLUT4 OS=Mus musculus OX=10090 GN=Aspscr1 PE=1 SV=1
Q9BZE9	Tether containing UBX domain for GLUT4 OS=Homo sapiens OX=9606 GN=ASPSCR1 PE=1 SV=1
Q9ZU93	Plant UBX domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUX2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005435 (this species only)
Ubiquitin family	ULD\|UFD\|UBX · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00789 all species →	UBX	UBX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR001012 all species →	Domain	UBX domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46467 all species →	TETHER CONTAINING UBX DOMAIN FOR GLUT4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0012506 all species →	Cellular Component	vesicle membrane	Interproscan
GO:0042593 all species →	Biological Process	glucose homeostasis	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15627	ASPSCR1, ASPL; tether containing UBX domain for GLUT4	-	Transcriptional misregulation in cancer	ko05202	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.