Detailed information of evm.model.Ap12.1497 in Astrangia poculata

Genomic Location: Ap12:15742471...15751769
NR annotation: CAH3040199.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000040 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00088
all species →		TrefoilTrefoil (P-type) domainDomainInterproscan
PF13385
all species →		Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF12248
all species →		Methyltransf_FAFarnesoic acid 0-methyl transferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000519
all species →		DomainP-type trefoil domainInterproscan
IPR044913
all species →		Homologous_superfamilyP-type trefoil domain superfamilyInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR022041
all species →		DomainFarnesoic acid O-methyl transferaseInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Ap12.1497. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap12.1497. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.1497.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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