Gene detail

Detailed information of evm.model.Ap12.1509 in Astrangia poculata

Genomic Location: Ap12:15886323...15888685
NR annotation: PFX18420.1, Fatty acid synthase [Stylophora pistillata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P12276	Fatty acid synthase OS=Gallus gallus OX=9031 GN=FASN PE=1 SV=5
P49327	Fatty acid synthase OS=Homo sapiens OX=9606 GN=FASN PE=1 SV=3
P19096	Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003022 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02801 all species →	Ketoacyl-synt_C	Beta-ketoacyl synthase, C-terminal domain	Domain	Interproscan
PF16197 all species →	KAsynt_C_assoc	Ketoacyl-synthetase C-terminal extension	Family	Interproscan
PF00109 all species →	ketoacyl-synt	Beta-ketoacyl synthase, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018201 all species →	Active_site	Beta-ketoacyl synthase, active site	Interproscan
IPR020841 all species →	Domain	Polyketide synthase, beta-ketoacyl synthase domain	Interproscan
IPR014031 all species →	Domain	Beta-ketoacyl synthase, C-terminal	Interproscan
IPR050091 all species →	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan
IPR032821 all species →	Domain	Polyketide synthase, C-terminal extension	Interproscan
IPR016039 all species →	Homologous_superfamily	Thiolase-like	Interproscan
IPR014030 all species →	Domain	Beta-ketoacyl synthase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775 all species →	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004315 all species →	Molecular Function	3-oxoacyl-[acyl-carrier-protein] synthase activity	Interproscan
GO:0006633 all species →	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0004312 all species →	Molecular Function	fatty acid synthase activity	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap12.1509.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.