Genomic Location: Ap12:16301495...16312114
NR annotation: XP_020609386.1, ATP synthase subunit d, mitochondrial-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap12.1551 |
| Transcript |
| evm.model.Ap12.1551 |
| Protein |
| evm.model.Ap12.1551 |
| UniProt accession | Description |
|---|---|
| Q7SI16 | ATP synthase subunit d, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=atp7 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007381 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05873 all species → | Mt_ATP-synt_D | ATP synthase D chain, mitochondrial (ATP5H) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008689 all species → | Family | ATP synthase, F0 complex, subunit D, mitochondrial | Interproscan |
| IPR036228 all species → | Homologous_superfamily | ATP synthase, F0 complex, subunit D superfamily, mitochondrial | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12700 all species → | ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000276 all species → | Cellular Component | obsolete mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | Interproscan |
| GO:0015078 all species → | Molecular Function | proton transmembrane transporter activity | Interproscan |
| GO:0015986 all species → | Biological Process | proton motive force-driven ATP synthesis | Interproscan |
| GO:0000274 all species → | Cellular Component | obsolete mitochondrial proton-transporting ATP synthase, stator stalk | Interproscan |
| GO:0046933 all species → | Molecular Function | proton-transporting ATP synthase activity, rotational mechanism | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K02138 | ATPeF0D, ATP5H, ATP7; F-type H+-transporting ATPase subunit d | - | Diabetic cardiomyopathy | ko05415 | deepkoala |
Transcript abundance of evm.model.Ap12.1551 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
