Detailed information of evm.model.Ap12.1707 in Astrangia poculata

Genomic Location: Ap12:17893004...17903486
NR annotation: XP_020607337.1, nudC domain-containing protein 3-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IVD9NudC domain-containing protein 3 OS=Homo sapiens OX=9606 GN=NUDCD3 PE=1 SV=3
Q5RB75NudC domain-containing protein 3 OS=Pongo abelii OX=9601 GN=NUDCD3 PE=2 SV=1
Q8R1N4NudC domain-containing protein 3 OS=Mus musculus OX=10090 GN=Nudcd3 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001876 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04969
all species →		CSCS domainDomainInterproscan
PF14050
all species →		Nudc_NN-terminal conserved domain of Nudc.FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007052
all species →		DomainCS domainInterproscan
IPR008978
all species →		Homologous_superfamilyHSP20-like chaperoneInterproscan
IPR025934
all species →		DomainNudC N-terminal domainInterproscan
IPR037898
all species →		FamilyNudC familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12356
all species →		NUCLEAR MOVEMENT PROTEIN NUDCInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006457
all species →		Biological Processprotein foldingInterproscan
GO:0051082
all species →		Molecular Functionunfolded protein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.1707.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP