Detailed information of evm.model.Ap12.1708 in Astrangia poculata

Genomic Location: Ap12:17911233...17911919
NR annotation: XP_020607341.1, membrane-associated progesterone receptor component 2-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P70580Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3
Q17QC0Membrane-associated progesterone receptor component 1 OS=Bos taurus OX=9913 GN=PGRMC1 PE=2 SV=3
O55022Membrane-associated progesterone receptor component 1 OS=Mus musculus OX=10090 GN=Pgrmc1 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003269 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00173
all species →		Cyt-b5Cytochrome b5-like Heme/Steroid binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001496
all species →		DomainSOCS box domainInterproscan
IPR050577
all species →		FamilyCytochrome b5/MAPR and VMP1 familiesInterproscan
IPR036400
all species →		Homologous_superfamilyCytochrome b5-like heme/steroid binding domain superfamilyInterproscan
IPR001199
all species →		DomainCytochrome b5-like heme/steroid binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10281
all species →		MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0012505
all species →		Cellular Componentendomembrane systemInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.1708.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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