Detailed information of evm.model.Ap12.1720 in Astrangia poculata

Genomic Location: Ap12:18026241...18033458
NR annotation: XP_020600845.1, synaptogyrin-2-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7E3W5Synaptogyrin-2 OS=Bos taurus OX=9913 GN=SYNGR2 PE=2 SV=1
O43760Synaptogyrin-2 OS=Homo sapiens OX=9606 GN=SYNGR2 PE=1 SV=1
O55101Synaptogyrin-2 OS=Mus musculus OX=10090 GN=Syngr2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007282 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01284
all species →		MARVELMembrane-associating domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016579
all species →		FamilySynaptogyrinInterproscan
IPR008253
all species →		DomainMarvel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10838
all species →		SYNAPTOGYRINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030672
all species →		Cellular Componentsynaptic vesicle membraneInterproscan
GO:0031594
all species →		Cellular Componentneuromuscular junctionInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K21956DRAM2; DNA damage-regulated autophagy modulator protein 2-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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