Gene detail

Detailed information of evm.model.Ap12.1806 in Astrangia poculata

Genomic Location: Ap12:19021046...19023744
NR annotation: XP_020605563.1, glutathione S-transferase U20-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q03662	Probable glutathione S-transferase OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q8L7C9	Glutathione S-transferase U20 OS=Arabidopsis thaliana OX=3702 GN=GSTU20 PE=1 SV=1
Q03664	Probable glutathione S-transferase OS=Nicotiana tabacum OX=4097 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001466 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13409 all species →	GST_N_2	Glutathione S-transferase, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR045074 all species →	Domain	Glutathione S-transferases Tau, C-terminal alpha helical domain, plant	Interproscan
IPR010987 all species →	Domain	Glutathione S-transferase, C-terminal-like	Interproscan
IPR050983 all species →	Family	Glutathione S-transferase Omega/HSP26	Interproscan
IPR036282 all species →	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan
IPR004045 all species →	Domain	Glutathione S-transferase, N-terminal	Interproscan
IPR040079 all species →	Family	Glutathione transferase family	Interproscan
IPR045073 all species →	Family	Glutathione S-transferase Omega/Tau-like	Interproscan
IPR005442 all species →	Family	Glutathione S-transferase, omega-class	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43968 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004364 all species →	Molecular Function	glutathione transferase activity	Interproscan
GO:0006749 all species →	Biological Process	glutathione metabolic process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00799	GST, gst; glutathione S-transferase	EC:2.5.1.18	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.