Detailed information of evm.model.Ap12.1966 in Astrangia poculata

Genomic Location: Ap12:20591133...20591914
NR annotation: XP_020611984.1, E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000277 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01436
all species →		NHLNHL repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011042
all species →		Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR001258
all species →		RepeatNHL repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10680
all species →		PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.1966.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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