Gene detail

Detailed information of evm.model.Ap12.2013 in Astrangia poculata

Genomic Location: Ap12:21060674...21079409
NR annotation: XP_020611262.1, hexosaminidase D-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8WVB3	Hexosaminidase D OS=Homo sapiens OX=9606 GN=HEXD PE=1 SV=3
A6QNR0	Hexosaminidase D OS=Bos taurus OX=9913 GN=HEXD PE=2 SV=2
Q3U4H6	Hexosaminidase D OS=Mus musculus OX=10090 GN=Hexd PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001494 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00728 all species →	Glyco_hydro_20	Glycosyl hydrolase family 20, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015883 all species →	Domain	Glycoside hydrolase family 20, catalytic domain	Interproscan
IPR038901 all species →	Family	Hexosaminidase D-like	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21040 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0015929 all species →	Molecular Function	hexosaminidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14459	HEX; hexosaminidase	EC:3.2.1.52	Other glycan degradation	ko00511	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.