Detailed information of evm.model.Ap12.2114 in Astrangia poculata

Genomic Location: Ap12:22150266...22164438
NR annotation: KAJ7382979.1, Intermediate filament tail domain-containing protein [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4R899Lamin tail domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=LMNTD1 PE=2 SV=1
Q8N9Z9Lamin tail domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LMNTD1 PE=1 SV=2
Q9D4C1Lamin tail domain-containing protein 1 OS=Mus musculus OX=10090 GN=Lmntd1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002850 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00932
all species →		LTDLamin Tail DomainDomainInterproscan
PF00038
all species →		FilamentIntermediate filament proteinCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001322
all species →		DomainLamin tail domainInterproscan
IPR042840
all species →		FamilyLamin tail domain-containing protein 1Interproscan
IPR036415
all species →		Homologous_superfamilyLamin tail domain superfamilyInterproscan
IPR039008
all species →		DomainIntermediate filament, rod domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47012
all species →		LAMIN TAIL DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005635
all species →		Cellular Componentnuclear envelopeInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.2114.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP