Detailed information of evm.model.Ap12.2116 in Astrangia poculata

Genomic Location: Ap12:22183259...22198817
NR annotation: XP_027036975.1, uncharacterized protein LOC113665476 [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q704V6Toll-like receptor 6 OS=Bos taurus OX=9913 GN=TLR6 PE=2 SV=1
Q15399Toll-like receptor 1 OS=Homo sapiens OX=9606 GN=TLR1 PE=1 SV=3
Q9EPW9Toll-like receptor 6 OS=Mus musculus OX=10090 GN=Tlr6 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000113 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01582
all species →		TIRTIR domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017241
all species →		FamilyToll-like receptorInterproscan
IPR035897
all species →		Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR000157
all species →		DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24365
all species →		TOLL-LIKE RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002224
all species →		Biological Processtoll-like receptor signaling pathwayInterproscan
GO:0004888
all species →		Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0006954
all species →		Biological Processinflammatory responseInterproscan
GO:0006955
all species →		Biological Processimmune responseInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0038023
all species →		Molecular Functionsignaling receptor activityInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.2116.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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