Detailed information of evm.model.Ap12.2138 in Astrangia poculata

Genomic Location: Ap12:22477319...22479216
NR annotation: XP_020605804.1, uncharacterized protein LOC110044577 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y2C9Toll-like receptor 6 OS=Homo sapiens OX=9606 GN=TLR6 PE=1 SV=2
Q0ZUL9Toll-like receptor 6 OS=Dasypus novemcinctus OX=9361 GN=TLR6 PE=2 SV=1
Q704V6Toll-like receptor 6 OS=Bos taurus OX=9913 GN=TLR6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000113 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13676
all species →		TIR_2TIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000157
all species →		DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR035897
all species →		Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR017241
all species →		FamilyToll-like receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24365
all species →		TOLL-LIKE RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0002224
all species →		Biological Processtoll-like receptor signaling pathwayInterproscan
GO:0004888
all species →		Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0006954
all species →		Biological Processinflammatory responseInterproscan
GO:0006955
all species →		Biological Processimmune responseInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0038023
all species →		Molecular Functionsignaling receptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.2138.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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