Detailed information of evm.model.Ap12.214 in Astrangia poculata

Genomic Location: Ap12:1961865...1973748
NR annotation: XP_020626555.1, serine/threonine-protein phosphatase alpha-3 isoform-like isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q627N3Serine/threonine-protein phosphatase PP1-beta OS=Caenorhabditis briggsae OX=6238 GN=gsp-2 PE=3 SV=1
P48727Serine/threonine-protein phosphatase PP1-beta OS=Caenorhabditis elegans OX=6239 GN=gsp-2 PE=1 SV=1
P36873Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Homo sapiens OX=9606 GN=PPP1CC PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000468 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00149
all species →		MetallophosCalcineurin-like phosphoesteraseDomainInterproscan
PF16891
all species →		STPPase_NSerine-threonine protein phosphatase N-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006186
all species →		DomainSerine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphataseInterproscan
IPR004843
all species →		DomainCalcineurin-like phosphoesterase domain, ApaH typeInterproscan
IPR031675
all species →		DomainSerine-threonine protein phosphatase, N-terminalInterproscan
IPR050341
all species →		FamilySerine/threonine-protein phosphatase PP1 catalytic subunitInterproscan
IPR029052
all species →		Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11668
all species →		SERINE/THREONINE PROTEIN PHOSPHATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016787
all species →		Molecular Functionhydrolase activityInterproscan
GO:0004722
all species →		Molecular Functionprotein serine/threonine phosphatase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06269PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunitEC:3.1.3.16
Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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