Detailed information of evm.model.Ap12.2151_evm.model.Ap12.2154 in Astrangia poculata

Genomic Location: Ap12:22636218...22650479
NR annotation: XP_020619255.1, kelch-like protein 12 isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZKD9Kelch-like protein 20 OS=Gallus gallus OX=9031 GN=KLHL20 PE=2 SV=1
Q8VCK5Kelch-like protein 20 OS=Mus musculus OX=10090 GN=Klhl20 PE=2 SV=2
Q08DK3Kelch-like protein 20 OS=Bos taurus OX=9913 GN=KLHL20 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000253 (this species only)
Transcription factor familyZBTB · all TF in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|BTB · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07707
all species →		BACKBTB And C-terminal KelchDomainInterproscan
PF13415
all species →		Kelch_3Galactose oxidase, central domainRepeatInterproscan
PF00651
all species →		BTBBTB/POZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015915
all species →		Homologous_superfamilyKelch-type beta propellerInterproscan
IPR011333
all species →		Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR000210
all species →		DomainBTB/POZ domainInterproscan
IPR006652
all species →		RepeatKelch repeat type 1Interproscan
IPR011705
all species →		DomainBTB/Kelch-associatedInterproscan
IPR017096
all species →		FamilyBTB-kelch proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45632
all species →		LD33804PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.2151_evm.model.Ap12.2154.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP