Detailed information of evm.model.Ap12.2186 in Astrangia poculata

Genomic Location: Ap12:22932823...22936228
NR annotation: KAJ7387854.1, hypothetical protein OS493_001201 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BFQ6Solute carrier family 49 member 4 OS=Mus musculus OX=10090 GN=Slc49a4 PE=2 SV=1
Q66H95Solute carrier family 49 member 4 OS=Rattus norvegicus OX=10116 GN=Slc49a4 PE=2 SV=1
Q6GNV7Solute carrier family 49 member 4 homolog OS=Xenopus laevis OX=8355 GN=slc49a4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000479 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07690
all species →		MFS_1Major Facilitator SuperfamilyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036259
all species →		Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR049680
all species →		FamilySolute carrier family 49-likeInterproscan
IPR011701
all species →		FamilyMajor facilitator superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10924
all species →		MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0043231
all species →		Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0051184
all species →		Molecular Functionobsolete cofactor transmembrane transporter activityInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.2186.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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