Detailed information of evm.model.Ap12.2237 in Astrangia poculata

Genomic Location: Ap12:23826856...23827995
NR annotation: XP_020628286.1, rho GTPase-activating protein 100F-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9V9S7Rho GTPase-activating protein 100F OS=Drosophila melanogaster OX=7227 GN=RhoGAP100F PE=1 SV=2
Q86NH1Rho GTPase-activating protein syd-1 OS=Caenorhabditis elegans OX=6239 GN=syd-1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007812 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595
all species →		PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →		DomainPDZ domainInterproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR052118
all species →		FamilyRho GTPase-activating regulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46150
all species →		RHO GTPASE-ACTIVATING PROTEIN 100FInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005096
all species →		Molecular FunctionGTPase activator activityInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0046578
all species →		Biological Processregulation of Ras protein signal transductionInterproscan
GO:0097060
all species →		Cellular Componentsynaptic membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.2237.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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