Detailed information of evm.model.Ap12.2256 in Astrangia poculata

Genomic Location: Ap12:23996148...24033858
NR annotation: CAH3158849.1, unnamed protein product [Porites lobata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q86TZ1Tetratricopeptide repeat protein 6 OS=Homo sapiens OX=9606 GN=TTC6 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002882 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13181
all species →
TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13414
all species →
TPR_11TPR repeatRepeatInterproscan
PF14559
all species →
TPR_19Tetratricopeptide repeatRepeatInterproscan
PF00515
all species →
TPR_1Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR050498
all species →
FamilyPhotosystem I assembly protein Ycf3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44858
all species →
TETRATRICOPEPTIDE REPEAT PROTEIN 6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24929TTC6; tetratricopeptide repeat protein 6-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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