Detailed information of evm.model.Ap12.2393 in Astrangia poculata

Genomic Location: Ap12:25302711...25321749
NR annotation: XP_020606927.1, sodium-coupled monocarboxylate transporter 1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5BL81Sodium-coupled monocarboxylate transporter 1 OS=Xenopus tropicalis OX=8364 GN=slc5a8 PE=2 SV=1
Q7SYH5Sodium-coupled monocarboxylate transporter 1 OS=Xenopus laevis OX=8355 GN=slc5a8 PE=2 SV=1
Q8N695Sodium-coupled monocarboxylate transporter 1 OS=Homo sapiens OX=9606 GN=SLC5A8 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000585 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00474
all species →		SSFSodium:solute symporter familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038377
all species →		Homologous_superfamilySodium/glucose symporter superfamilyInterproscan
IPR051163
all species →		FamilySodium:Solute Symporter (SSF)Interproscan
IPR018212
all species →		Conserved_siteSodium/solute symporter, conserved siteInterproscan
IPR001734
all species →		FamilySodium/solute symporterInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42985
all species →		SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006814
all species →		Biological Processsodium ion transportInterproscan
GO:0015293
all species →		Molecular Functionsymporter activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14388SLC5A8_12, SMCT; solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12-Transportersko02000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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