Gene detail

Detailed information of evm.model.Ap12.2410 in Astrangia poculata

Genomic Location: Ap12:25480635...25486046
NR annotation: XP_022790804.1, ER membrane protein complex subunit 6-like isoform X2 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GLC5	ER membrane protein complex subunit 6 OS=Xenopus tropicalis OX=8364 GN=emc6 PE=3 SV=1
Q68EU8	ER membrane protein complex subunit 6 OS=Xenopus laevis OX=8355 GN=emc6 PE=3 SV=1
Q6P0F0	ER membrane protein complex subunit 6 OS=Danio rerio OX=7955 GN=emc6 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009199 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07019 all species →	EMC6	EMC6	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029008 all species →	Family	ER membrane protein complex subunit 6-like	Interproscan
IPR008504 all species →	Family	ER membrane protein complex subunit 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20994 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000045 all species →	Biological Process	autophagosome assembly	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0034975 all species →	Biological Process	protein folding in endoplasmic reticulum	Interproscan
GO:0072546 all species →	Cellular Component	EMC complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23567	EMC6, TMEM93; ER membrane protein complex subunit 6	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.