Detailed information of evm.model.Ap12.2527 in Astrangia poculata

Genomic Location: Ap12:26733624...26750315
NR annotation: XP_020620621.1, protein kinase C and casein kinase substrate in neurons protein 2-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O13154Protein kinase C and casein kinase substrate in neurons protein 2 OS=Gallus gallus OX=9031 GN=PACSIN2 PE=1 SV=1
Q99JB8Protein kinase C and casein kinase II substrate protein 3 OS=Mus musculus OX=10090 GN=Pacsin3 PE=1 SV=1
Q9DDA9Protein kinase C and casein kinase substrate in neurons protein 2 OS=Xenopus laevis OX=8355 GN=pacsin2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002070 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00611
all species →		FCHFes/CIP4, and EFC/F-BAR homology domainFamilyInterproscan
PF14604
all species →		SH3_9Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001060
all species →		DomainFCH domainInterproscan
IPR031160
all species →		DomainF-BAR domainInterproscan
IPR001452
all species →		DomainSH3 domainInterproscan
IPR027267
all species →		Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23065
all species →		PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005543
all species →		Molecular Functionphospholipid bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007010
all species →		Biological Processcytoskeleton organizationInterproscan
GO:0030100
all species →		Biological Processregulation of endocytosisInterproscan
GO:0097320
all species →		Biological Processplasma membrane tubulationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.2527.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP