Detailed information of evm.model.Ap12.2562 in Astrangia poculata

Genomic Location: Ap12:27096719...27099728
NR annotation: PFX28613.1, ADP-ribosylation factor-like protein 1 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P61211ADP-ribosylation factor-like protein 1 OS=Mus musculus OX=10090 GN=Arl1 PE=1 SV=1
P61212ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus OX=10116 GN=Arl1 PE=1 SV=1
P40616ADP-ribosylation factor-like protein 1 OS=Homo sapiens OX=9606 GN=ARL1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001760 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00025
all species →		ArfADP-ribosylation factor familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR024156
all species →		FamilySmall GTPase superfamily, ARF typeInterproscan
IPR006689
all species →		FamilySmall GTPase superfamily, ARF/SAR typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11711
all species →		ADP RIBOSYLATION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0003924
all species →		Molecular FunctionGTPase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.2562.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP