Detailed information of evm.model.Ap12.2599 in Astrangia poculata

Genomic Location: Ap12:27404627...27422633
NR annotation: XP_027050268.1, oocyte zinc finger protein XlCOF7.1-like isoform X1 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003780 (this species only)
Transcription factor familyzf-C2H2 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13912
all species →		zf-C2H2_6C2H2-type zinc fingerDomainInterproscan
PF21549
all species →		PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046341
all species →		Homologous_superfamilySET domain superfamilyInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24379
all species →		KRAB AND ZINC FINGER DOMAIN-CONTAININGInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap12.2599. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.2599.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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