Detailed information of evm.model.Ap12.2605 in Astrangia poculata

Genomic Location: Ap12:27450568...27467012
NR annotation: XP_020620802.1, Hermansky-Pudlak syndrome 5 protein homolog [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q177G4BLOC-2 complex member HPS5 homolog OS=Aedes aegypti OX=7159 GN=p PE=3 SV=1
Q5TU55BLOC-2 complex member HPS5 homolog OS=Anopheles gambiae OX=7165 GN=p PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003369 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap12.2605. This gene does have a gene model — the search simply returned no hit.
 InterPro
No InterPro signature was detected for evm.model.Ap12.2605. This gene does have a gene model — the search simply returned no hit.
 PANTHER
PANTHER termDescriptionSource
PTHR23287
all species →		RUBY-EYE2-LIKE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0048066
all species →		Biological Processdevelopmental pigmentationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20191HPS5; Hermansky-Pudlak syndrome 5 protein-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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