Detailed information of evm.model.Ap12.2640 in Astrangia poculata

Genomic Location: Ap12:27862218...27873802
NR annotation: CAH3106556.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
H2KZZ6Rab GTPase-activating protein tbc-11 OS=Caenorhabditis elegans OX=6239 GN=tbc-11 PE=1 SV=1
Q5ZJ17Rab GTPase-activating protein 1-like OS=Gallus gallus OX=9031 GN=RABGAP1L PE=2 SV=1
Q5R372Rab GTPase-activating protein 1-like OS=Homo sapiens OX=9606 GN=RABGAP1L PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008359 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00566
all species →		RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000195
all species →		DomainRab-GAP-TBC domainInterproscan
IPR035969
all species →		Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR050302
all species →		FamilyRab GTPase-activating TBC domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47219
all species →		RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap12.2640. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19944TBC1D10; TBC1 domain family member 10-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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