Genomic Location: Ap12:28581019...28592082
NR annotation: XP_020625206.1, kinesin-like protein KIF18A [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap12.2727.1.5f15e76b |
| Transcript |
| evm.model.Ap12.2727.1.5f15e76b |
| Protein |
| evm.model.Ap12.2727.1.5f15e76b |
| UniProt accession | Description |
|---|---|
| Q8NI77 | Kinesin-like protein KIF18A OS=Homo sapiens OX=9606 GN=KIF18A PE=1 SV=2 |
| Q91WD7 | Kinesin-like protein KIF18A OS=Mus musculus OX=10090 GN=Kif18a PE=2 SV=1 |
| Q5ZLK6 | Kinesin-like protein KIF18B OS=Gallus gallus OX=9031 GN=KIF18B PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003242 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00225 all species → | Kinesin | Kinesin motor domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001752 all species → | Domain | Kinesin motor domain | Interproscan |
| IPR019821 all species → | Conserved_site | Kinesin motor domain, conserved site | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR027640 all species → | Family | Kinesin-like protein | Interproscan |
| IPR036961 all species → | Homologous_superfamily | Kinesin motor domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47968 all species → | CENTROMERE PROTEIN E | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003777 all species → | Molecular Function | microtubule motor activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0007018 all species → | Biological Process | microtubule-based movement | Interproscan |
| GO:0008017 all species → | Molecular Function | microtubule binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10401 | KIF18A; kinesin family member 18A | - | Cytoskeleton proteins | ko04812 | deepkoala |
Transcript abundance of evm.model.Ap12.2727.1.5f15e76b across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
