Detailed information of evm.model.Ap12.2808 in Astrangia poculata

Genomic Location: Ap12:29387764...29391729
NR annotation: XP_020603882.1, probable methyltransferase-like protein 15 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JN9512S rRNA N(4)-cytidine methyltransferase METTL15 OS=Bos taurus OX=9913 GN=METTL15 PE=2 SV=1
A6NJ7812S rRNA N(4)-cytidine methyltransferase METTL15 OS=Homo sapiens OX=9606 GN=METTL15 PE=1 SV=1
Q5R5T512S rRNA N(4)-cytidine methyltransferase METTL15 OS=Pongo abelii OX=9601 GN=METTL15 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008962 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01795
all species →
Methyltransf_5MraW methylase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002903
all species →
FamilyRibosomal RNA small subunit methyltransferase HInterproscan
IPR023397
all species →
Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamilyInterproscan
IPR029063
all species →
Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11265
all species →
S-ADENOSYL-METHYLTRANSFERASE MRAWInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008168
all species →
Molecular Functionmethyltransferase activityInterproscan
GO:0070475
all species →
Biological ProcessrRNA base methylationInterproscan
GO:0071424
all species →
Molecular FunctionrRNA (cytosine-N4-)-methyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.2808.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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