Gene detail

Detailed information of evm.model.Ap12.461 in Astrangia poculata

Genomic Location: Ap12:4635259...4644258
NR annotation: CAH3137802.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96S06	Lipase maturation factor 1 OS=Homo sapiens OX=9606 GN=LMF1 PE=1 SV=1
Q3U3R4	Lipase maturation factor 1 OS=Mus musculus OX=10090 GN=Lmf1 PE=1 SV=1
Q0P5C0	Lipase maturation factor 1 OS=Bos taurus OX=9913 GN=LMF1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004032 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06762 all species →	LMF1	Lipase maturation factor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009613 all species →	Family	Lipase maturation factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14463 all species →	LIPASE MATURATION FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051604 all species →	Biological Process	protein maturation	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23555	LMF1; lipase maturation factor 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.