Gene detail

Detailed information of evm.model.Ap12.504 in Astrangia poculata

Genomic Location: Ap12:5241752...5260875
NR annotation: XP_022780293.1, sn1-specific diacylglycerol lipase beta-like isoform X1 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap12.504

atgccggccttggttgcttttaaacgtcgatggcgtatcggtagcgacgatctgtttttcccagcagcaataggagtcgtagttagagtattatggttggctgtaatatccatgatctatggctttgagaattatgagatcagagattgtgatgcttggctggagttacaagtgtttttcattggggtaattgttttaaccagcctagttattctcaacgaagtagccatcatatacatcagcatgcaggggaccttggttgattcacggcctcgccgccacatgccaatatttctgtatatccaacttgcgctatatttgccagagcttctgtggacaattcttggtacttactgggcagttaataacagtgctgactgtgagctaagcttgataattgctgtatggatttctgtggctctggagtggtcaatcttgttggctgtgtttatcggtgttttggtgctatttgatccactgggaagtgtccacaaggatccttttgggagagagttttcagctactatgcaagaatcaacaaaggagctgtgggagaagcgatgtcgttggctgtgctgctttttcgcgggtagagatgaccagtacttgagtgcggtgtcggacattgctgatatactggcatctggactccatgatgtggatttggtgccttctgatgttgctgttggtctcattctccttcaagaagaacaagaaagagagcatgcagaaaagaggacaaaaggggagattcttcaaaaagggacccctgttaatctaagtgatcctaaagagaaatctgtggtggaagatgctgcccatttcatgaagtttgcactgggttcttatgggtggcccctgtacatgtttatgaatccttgcagtggaccctggagcctctgtgggggaataaggtgctgtggatgttgccgtgtcagtgtggagcacatctccagcgacaactgctgccattgtaactctgctggtctgaaactgcaggctgaactggaggatattgatttggtgtactgctgttatcacaacaagatttacgaggtgccattttacgtggcagtggatcatgatcaccaggcggttgttgtttccattcgtggatcgctctctatgcaggacgcgctgactgacctgacaggacaacaagaagagctgaatattgatggagttgaaacatttcacgcccataaggggattcttcgatgcgcacgttatgtaaagtcggttctggagaaacgagaactcattcagtgtgcttactctagagctggcgagaattatcgtctagtaatcgtgggtcactcactgggtgctgggacggcatcgttattatctgtccttctcaaaccaacctaccctgacctgatttgcttcgcctactctaatcctagtgtgctaagtgctccagccaccccatactgtgaagattttatcgtatctgttgttcttggaaaagatgctgttcccaggatgggagttaaaagtggtgacgagttaagacaagatcttgcgtcggttattagaagatgctcagtgccaaagtaccgtgttttaatgagtggttgttggcgagcgctcttcttctttcttggtcccagtcctcgacaagccggacaaggtgacggtcggcattttttctctggctctcgccagtacagatccactcttatccatcatacgtgggaaaatagtctgactgaacctcttctagaaggcatggaagatgaaactttaggactgactactggagaccagtcccagagatacttcgccgacaaggaactggaatcagtacccacatccttgcccccagtctccgccgagcaactcttccctgcaggaaaaatcttacagatcgacgagaggacatcctgcagactcgaagaacaatattatgacgtcatgtgggcagataaagaaaattacgtcaagattattatccatcccggcatgctaagcgatcatatgccggatcgcgtaatgaaggcgttggatagaatgttccttcaagaacacagagtgcaagaagtgtag

Transcript

evm.model.Ap12.504

ATGCCGGCCTTGGTTGCTTTTAAACGTCGATGGCGTATCGGTAGCGACGATCTGTTTTTCCCAGCAGCAATAGGAGTCGTAGTTAGAGTATTATGGTTGGCTGTAATATCCATGATCTATGGCTTTGAGAATTATGAGATCAGAGATTGTGATGCTTGGCTGGAGTTACAAGTGTTTTTCATTGGGGTAATTGTTTTAACCAGCCTAGTTATTCTCAACGAAGTAGCCATCATATACATCAGCATGCAGGGGACCTTGGTTGATTCACGGCCTCGCCGCCACATGCCAATATTTCTGTATATCCAACTTGCGCTATATTTGCCAGAGCTTCTGTGGACAATTCTTGGTACTTACTGGGCAGTTAATAACAGTGCTGACTGTGAGCTAAGCTTGATAATTGCTGTATGGATTTCTGTGGCTCTGGAGTGGTCAATCTTGTTGGCTGTGTTTATCGGTGTTTTGGTGCTATTTGATCCACTGGGAAGTGTCCACAAGGATCCTTTTGGGAGAGAGTTTTCAGCTACTATGCAAGAATCAACAAAGGAGCTGTGGGAGAAGCGATGTCGTTGGCTGTGCTGCTTTTTCGCGGGTAGAGATGACCAGTACTTGAGTGCGGTGTCGGACATTGCTGATATACTGGCATCTGGACTCCATGATGTGGATTTGGTGCCTTCTGATGTTGCTGTTGGTCTCATTCTCCTTCAAGAAGAACAAGAAAGAGAGCATGCAGAAAAGAGGACAAAAGGGGAGATTCTTCAAAAAGGGACCCCTGTTAATCTAAGTGATCCTAAAGAGAAATCTGTGGTGGAAGATGCTGCCCATTTCATGAAGTTTGCACTGGGTTCTTATGGGTGGCCCCTGTACATGTTTATGAATCCTTGCAGTGGACCCTGGAGCCTCTGTGGGGGAATAAGGTGCTGTGGATGTTGCCGTGTCAGTGTGGAGCACATCTCCAGCGACAACTGCTGCCATTGTAACTCTGCTGGTCTGAAACTGCAGGCTGAACTGGAGGATATTGATTTGGTGTACTGCTGTTATCACAACAAGATTTACGAGGTGCCATTTTACGTGGCAGTGGATCATGATCACCAGGCGGTTGTTGTTTCCATTCGTGGATCGCTCTCTATGCAGGACGCGCTGACTGACCTGACAGGACAACAAGAAGAGCTGAATATTGATGGAGTTGAAACATTTCACGCCCATAAGGGGATTCTTCGATGCGCACGTTATGTAAAGTCGGTTCTGGAGAAACGAGAACTCATTCAGTGTGCTTACTCTAGAGCTGGCGAGAATTATCGTCTAGTAATCGTGGGTCACTCACTGGGTGCTGGGACGGCATCGTTATTATCTGTCCTTCTCAAACCAACCTACCCTGACCTGATTTGCTTCGCCTACTCTAATCCTAGTGTGCTAAGTGCTCCAGCCACCCCATACTGTGAAGATTTTATCGTATCTGTTGTTCTTGGAAAAGATGCTGTTCCCAGGATGGGAGTTAAAAGTGGTGACGAGTTAAGACAAGATCTTGCGTCGGTTATTAGAAGATGCTCAGTGCCAAAGTACCGTGTTTTAATGAGTGGTTGTTGGCGAGCGCTCTTCTTCTTTCTTGGTCCCAGTCCTCGACAAGCCGGACAAGGTGACGGTCGGCATTTTTTCTCTGGCTCTCGCCAGTACAGATCCACTCTTATCCATCATACGTGGGAAAATAGTCTGACTGAACCTCTTCTAGAAGGCATGGAAGATGAAACTTTAGGACTGACTACTGGAGACCAGTCCCAGAGATACTTCGCCGACAAGGAACTGGAATCAGTACCCACATCCTTGCCCCCAGTCTCCGCCGAGCAACTCTTCCCTGCAGGAAAAATCTTACAGATCGACGAGAGGACATCCTGCAGACTCGAAGAACAATATTATGACGTCATGTGGGCAGATAAAGAAAATTACGTCAAGATTATTATCCATCCCGGCATGCTAAGCGATCATATGCCGGATCGCGTAATGAAGGCGTTGGATAGAATGTTCCTTCAAGAACACAGAGTGCAAGAAGTGTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8NCG7	Diacylglycerol lipase-beta OS=Homo sapiens OX=9606 GN=DAGLB PE=1 SV=2
Q91WC9	Diacylglycerol lipase-beta OS=Mus musculus OX=10090 GN=Daglb PE=1 SV=2
P0C1S9	Diacylglycerol lipase-beta OS=Rattus norvegicus OX=10116 GN=Daglb PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001635 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01764 all species →	Lipase_3	Lipase (class 3)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002921 all species →	Domain	Fungal lipase-like domain	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR052214 all species →	Family	Diacylglycerol Lipase-Related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45792 all species →	DIACYLGLYCEROL LIPASE HOMOLOG-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0016042 all species →	Biological Process	lipid catabolic process	Interproscan
GO:0016298 all species →	Molecular Function	lipase activity	Interproscan
GO:0019369 all species →	Biological Process	arachidonate metabolic process	Interproscan
GO:0046340 all species →	Biological Process	diacylglycerol catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13806	DAGL; sn1-specific diacylglycerol lipase	EC:3.1.1.116	Phototransduction - fly	ko04745	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.