Detailed information of evm.model.Ap12.513 in Astrangia poculata

Genomic Location: Ap12:5414539...5498588
NR annotation: XP_027053269.1, uncharacterized protein LOC113680433 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001112 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00094
all species →
VWDvon Willebrand factor type D domainDomainInterproscan
PF07974
all species →
EGF_2EGF-like domainDomainInterproscan
PF13385
all species →
Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR002049
all species →
DomainLaminin-type EGF domainInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001791
all species →
DomainLaminin G domainInterproscan
IPR001846
all species →
Domainvon Willebrand factor, type D domainInterproscan
IPR013111
all species →
DomainEGF-like domain, extracellularInterproscan
IPR001774
all species →
DomainDelta/Serrate/lag-2 (DSL) proteinInterproscan
IPR009030
all species →
Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31513
all species →
EPHRIN TYPE-B RECEPTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007154
all species →
Biological Processcell communicationInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.513.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP