Gene detail

Detailed information of evm.model.Ap12.548 in Astrangia poculata

Genomic Location: Ap12:5979853...6001703
NR annotation: XP_022780306.1, atrial natriuretic peptide receptor 2-like [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap12.548

atggcaacatggcaacttagatacatcctattctccttgttcctcttccacttgacttcaattcagtcaaacagtgaaagcaataaccgagaagtacgtgtagttctactgtatccattcacgtcctgcgaacagttaatcacaactgacctcccgtttgcatcagcatttcttgtggctgtagacacggtaaacaacagcagctcgctgaattttaatatatcagtcggttggaatgatacgcgatgcagcgagctggttggaatctcagccatgaccgagcagcggaacctcggagtccacgcttttataggatcgggaaatcaagtttgtgcgacgtcagcccgagttgccgctgcttggaacttgccgatgatctcttacttttgcgacgaagacgacgtcacaaacaaacaacgttatccaaccttcgctcgtaccaggccacccaactctcagctaagcaagagcattctggctgtgctgaagaaattttcttggaaaagggtggccattatctactgtcatagcgatgactgttttagtcaacagcattgggagaatacgaaagaggacatgaagaagtactttgaaggcaatggaattaaagtttcttacgaagctagaatgccgatggaacatgaggaagctaagttagagcaagtcttggagaaaataaaaacaaaggctcgcatcgtaatactcgccacaaatcccgaatatgcgcctgcatttatggttgccgccaaaacgaaaggcatgacgaatggtgattacgcgtacatcatcagcacgctttctgacatacatccggatgagggtctggactactggtggtatgggttcggtgggatcaatcgatccgagaccgagaaagcctggcactcagtactaactctagttccaagaccttacaatgttagcaagacgttccagcaactcctgattgacaagtcaaagtcaagcggctatccttggaacaagaccaattatgagacgcaggatgaattcattcattatgctgtctacctctatgatgctgtgtatttgtacgctttggctctgaacaagacgttttcaaatggacaagacccaaagaatggaactgctgtgtttaacaatatgaaaagaacacatttcgaaagtattgctggatttgaggtacatgtagatgacaatggagacgtcgagttcaacatgacgcttcttgagttggttaaaaacgagaatggtgctgaactgaagcctgcgggtgaatttaaacttaacaaaacaggtacaaaccagatcctggaacttatgcccgggattaatatcacgtggactgagaatggtcagcgaacatctcctccagcagacaggcctgtttgtggatttgagggtgaactctgccccacgccttcaccgagtcctacgcaaccaagtaactccataacaagcatcaccaccgctgtcgtggtttcgtcggttatcgttgtttgcacagtcgtggcacttttctacttcaggaaacacgcttttgagaaagagcttgcgagtctgatatggaaggtaaactatggagacattgtgattcgttccaacaggggactcggtatgtcaaggctgtcaaacatgagcgagatatcagcggtaaacagagcccaggcaggcattacagtgggaacatataaggggaataccgtggttataaagcgagtggaaaaggatcaagtagatttgacaagaacggtgctccttgagctaaaacagattcgtgaagttcatcacccgaatttgacccggttctttggtgcatgcgtggaagctcccaacatctgcattctcacagaatattgttcaagaggaagcttacaggaaatcattctgaacgaggagattaagctggacagcatattcattcattcttttatcctagaaatcgtaacgggtatggaatatcttcatggcgtagatatcaagttccatgggcatctcacgtcatctaaatgtgtggtggatagccgctgggttttaaagatcacagaccatgggctcagagagttcaagtctcacaaaaaggtctctcgcgaacaccttagtgtctctcgcgaacacctttgtgttagaagtcgcaactatcaagcggactactcaaggttgttgtggacggccccagaaattttgcgacaaaaagacaagcgttacgtcggttctccaaaaggagatgtgtacagctttgggatcatagttcacgaactggagaccagaaatctgccatttagtgaatgtcaccttgaatcggaagaaattgtaggacgcgttttagccggtaccagtccgccgttccgtcctcctctccctgccaacgtggtgaataaagatctacacctcttgatgaaaatgtgctggaaagagattccggaagatagacctgacttttgggagataagaaagttgttgaaaaacctgcacggacgaaagaataacctcgtggataaaataatttatatgctggaggagcattcactcaatctggaaaaacttgtcgagaaacgaacggaacagtggattgaggaaaagaagaggacggaggaactgcttctcaacatgcttccaaagagtgttgctgatcagttaaaaagtggtcgaccagtagaagctgagaactttgacgaggtcaccgtgttcttcagcgatattgtaggattcacggcgctctcatcagaaagtactccattgcagattgtgaccttgctgaatgatctctacaccacatttgacgcaataattcaaggatatgatgtttacaaggtggagacgattggtgatgcatacatggtggtctctggtctaccgatcagaaacgggcatcaacacgccgaggaaatcgcttgcatggcgctccatcttctgcagtcagtgcagaaatttaaaataaagcaccgtcctgacgagaagcttaagctgagaattggcatccacagcggtcccgtctgtgcaggcgttgtcggcttgaaaatgcctcggtactgtttgtttggagatacagtgaacaccgcctcgagaatggaatccaatggagaagcgttaaagatccatatcagtgcagccaccaaagactacctggaaaggattgggggttatgtcatgcaggaaagaggatcgattgatatcaagggtaaaggcacattggtgacatattggctacacggaagggtctccgacgatcattcgtcaaaagccatcacaaaaacccggtcgggaactacatgtaccagtgaatattcttcatcgggaatagaggtggaactggatcgaacaactgatttcaacagtgtaaaccgctga

Transcript

evm.model.Ap12.548

ATGGCAACATGGCAACTTAGATACATCCTATTCTCCTTGTTCCTCTTCCACTTGACTTCAATTCAGTCAAACAGTGAAAGCAATAACCGAGAAGTACGTGTAGTTCTACTGTATCCATTCACGTCCTGCGAACAGTTAATCACAACTGACCTCCCGTTTGCATCAGCATTTCTTGTGGCTGTAGACACGGTAAACAACAGCAGCTCGCTGAATTTTAATATATCAGTCGGTTGGAATGATACGCGATGCAGCGAGCTGGTTGGAATCTCAGCCATGACCGAGCAGCGGAACCTCGGAGTCCACGCTTTTATAGGATCGGGAAATCAAGTTTGTGCGACGTCAGCCCGAGTTGCCGCTGCTTGGAACTTGCCGATGATCTCTTACTTTTGCGACGAAGACGACGTCACAAACAAACAACGTTATCCAACCTTCGCTCGTACCAGGCCACCCAACTCTCAGCTAAGCAAGAGCATTCTGGCTGTGCTGAAGAAATTTTCTTGGAAAAGGGTGGCCATTATCTACTGTCATAGCGATGACTGTTTTAGTCAACAGCATTGGGAGAATACGAAAGAGGACATGAAGAAGTACTTTGAAGGCAATGGAATTAAAGTTTCTTACGAAGCTAGAATGCCGATGGAACATGAGGAAGCTAAGTTAGAGCAAGTCTTGGAGAAAATAAAAACAAAGGCTCGCATCGTAATACTCGCCACAAATCCCGAATATGCGCCTGCATTTATGGTTGCCGCCAAAACGAAAGGCATGACGAATGGTGATTACGCGTACATCATCAGCACGCTTTCTGACATACATCCGGATGAGGGTCTGGACTACTGGTGGTATGGGTTCGGTGGGATCAATCGATCCGAGACCGAGAAAGCCTGGCACTCAGTACTAACTCTAGTTCCAAGACCTTACAATGTTAGCAAGACGTTCCAGCAACTCCTGATTGACAAGTCAAAGTCAAGCGGCTATCCTTGGAACAAGACCAATTATGAGACGCAGGATGAATTCATTCATTATGCTGTCTACCTCTATGATGCTGTGTATTTGTACGCTTTGGCTCTGAACAAGACGTTTTCAAATGGACAAGACCCAAAGAATGGAACTGCTGTGTTTAACAATATGAAAAGAACACATTTCGAAAGTATTGCTGGATTTGAGGTACATGTAGATGACAATGGAGACGTCGAGTTCAACATGACGCTTCTTGAGTTGGTTAAAAACGAGAATGGTGCTGAACTGAAGCCTGCGGGTGAATTTAAACTTAACAAAACAGGTACAAACCAGATCCTGGAACTTATGCCCGGGATTAATATCACGTGGACTGAGAATGGTCAGCGAACATCTCCTCCAGCAGACAGGCCTGTTTGTGGATTTGAGGGTGAACTCTGCCCCACGCCTTCACCGAGTCCTACGCAACCAAGTAACTCCATAACAAGCATCACCACCGCTGTCGTGGTTTCGTCGGTTATCGTTGTTTGCACAGTCGTGGCACTTTTCTACTTCAGGAAACACGCTTTTGAGAAAGAGCTTGCGAGTCTGATATGGAAGGTAAACTATGGAGACATTGTGATTCGTTCCAACAGGGGACTCGGTATGTCAAGGCTGTCAAACATGAGCGAGATATCAGCGGTAAACAGAGCCCAGGCAGGCATTACAGTGGGAACATATAAGGGGAATACCGTGGTTATAAAGCGAGTGGAAAAGGATCAAGTAGATTTGACAAGAACGGTGCTCCTTGAGCTAAAACAGATTCGTGAAGTTCATCACCCGAATTTGACCCGGTTCTTTGGTGCATGCGTGGAAGCTCCCAACATCTGCATTCTCACAGAATATTGTTCAAGAGGAAGCTTACAGGAAATCATTCTGAACGAGGAGATTAAGCTGGACAGCATATTCATTCATTCTTTTATCCTAGAAATCGTAACGGGTATGGAATATCTTCATGGCGTAGATATCAAGTTCCATGGGCATCTCACGTCATCTAAATGTGTGGTGGATAGCCGCTGGGTTTTAAAGATCACAGACCATGGGCTCAGAGAGTTCAAGTCTCACAAAAAGGTCTCTCGCGAACACCTTAGTGTCTCTCGCGAACACCTTTGTGTTAGAAGTCGCAACTATCAAGCGGACTACTCAAGGTTGTTGTGGACGGCCCCAGAAATTTTGCGACAAAAAGACAAGCGTTACGTCGGTTCTCCAAAAGGAGATGTGTACAGCTTTGGGATCATAGTTCACGAACTGGAGACCAGAAATCTGCCATTTAGTGAATGTCACCTTGAATCGGAAGAAATTGTAGGACGCGTTTTAGCCGGTACCAGTCCGCCGTTCCGTCCTCCTCTCCCTGCCAACGTGGTGAATAAAGATCTACACCTCTTGATGAAAATGTGCTGGAAAGAGATTCCGGAAGATAGACCTGACTTTTGGGAGATAAGAAAGTTGTTGAAAAACCTGCACGGACGAAAGAATAACCTCGTGGATAAAATAATTTATATGCTGGAGGAGCATTCACTCAATCTGGAAAAACTTGTCGAGAAACGAACGGAACAGTGGATTGAGGAAAAGAAGAGGACGGAGGAACTGCTTCTCAACATGCTTCCAAAGAGTGTTGCTGATCAGTTAAAAAGTGGTCGACCAGTAGAAGCTGAGAACTTTGACGAGGTCACCGTGTTCTTCAGCGATATTGTAGGATTCACGGCGCTCTCATCAGAAAGTACTCCATTGCAGATTGTGACCTTGCTGAATGATCTCTACACCACATTTGACGCAATAATTCAAGGATATGATGTTTACAAGGTGGAGACGATTGGTGATGCATACATGGTGGTCTCTGGTCTACCGATCAGAAACGGGCATCAACACGCCGAGGAAATCGCTTGCATGGCGCTCCATCTTCTGCAGTCAGTGCAGAAATTTAAAATAAAGCACCGTCCTGACGAGAAGCTTAAGCTGAGAATTGGCATCCACAGCGGTCCCGTCTGTGCAGGCGTTGTCGGCTTGAAAATGCCTCGGTACTGTTTGTTTGGAGATACAGTGAACACCGCCTCGAGAATGGAATCCAATGGAGAAGCGTTAAAGATCCATATCAGTGCAGCCACCAAAGACTACCTGGAAAGGATTGGGGGTTATGTCATGCAGGAAAGAGGATCGATTGATATCAAGGGTAAAGGCACATTGGTGACATATTGGCTACACGGAAGGGTCTCCGACGATCATTCGTCAAAAGCCATCACAAAAACCCGGTCGGGAACTACATGTACCAGTGAATATTCTTCATCGGGAATAGAGGTGGAACTGGATCGAACAACTGATTTCAACAGTGTAAACCGCTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P16065	Speract receptor OS=Strongylocentrotus purpuratus OX=7668 PE=2 SV=1
P20594	Atrial natriuretic peptide receptor 2 OS=Homo sapiens OX=9606 GN=NPR2 PE=1 SV=1
P16067	Atrial natriuretic peptide receptor 2 OS=Rattus norvegicus OX=10116 GN=Npr2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000156 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF01094 all species →	ANF_receptor	Receptor family ligand binding region	Family	Interproscan
PF00211 all species →	Guanylate_cyc	Adenylate and Guanylate cyclase catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR029787 all species →	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR001054 all species →	Domain	Adenylyl cyclase class-3/4/guanylyl cyclase	Interproscan
IPR028082 all species →	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR050401 all species →	Family	Cyclic nucleotide synthase	Interproscan
IPR001828 all species →	Domain	Receptor, ligand binding region	Interproscan
IPR018297 all species →	Conserved_site	Adenylyl cyclase class-4/guanylyl cyclase, conserved site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11920 all species →	GUANYLYL CYCLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0009190 all species →	Biological Process	cyclic nucleotide biosynthetic process	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0001653 all species →	Molecular Function	peptide receptor activity	Interproscan
GO:0004016 all species →	Molecular Function	adenylate cyclase activity	Interproscan
GO:0004383 all species →	Molecular Function	guanylate cyclase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006182 all species →	Biological Process	cGMP biosynthetic process	Interproscan
GO:0007168 all species →	Biological Process	receptor guanylyl cyclase signaling pathway	Interproscan
GO:0016849 all species →	Molecular Function	phosphorus-oxygen lyase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap12.548.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.