Detailed information of evm.model.Ap12.650 in Astrangia poculata

Genomic Location: Ap12:7249511...7250899
NR annotation: PFX15733.1, hypothetical protein AWC38_SpisGene20046 [Stylophora pistillata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011199 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01936
all species →		NYNNYN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021139
all species →		DomainNYN domainInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR001878
all species →		DomainZinc finger, CCHC-typeInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Ap12.650. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0004540
all species →		Molecular FunctionRNA nuclease activityInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap12.650.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP